Sort all JSON object keys alphabetically at every level in toolsnaps by
unmarshaling and remarshaling. This leverages Go's built-in behavior where
json.Marshal automatically sorts map keys alphabetically, ensuring
consistent field ordering and eliminating noop churn in diffs.

Co-authored-by: SamMorrowDrums <4811358+SamMorrowDrums@users.noreply.github.com>

Co-authored-by: SamMorrowDrums <4811358+SamMorrowDrums@users.noreply.github.com>

Co-authored-by: SamMorrowDrums <4811358+SamMorrowDrums@users.noreply.github.com>

* get it working

* clean up approach by moving cleantools inside builder, this simplifies remote server too

* add tests for trimming and deduplication

* error out in the builder if there are unrecognized tools

---------

Co-authored-by: Sam Morrow <info@sam-morrow.com>

- Added optional custom_instructions parameter to tool schema
- Updated implementation to pass custom instructions to agent assignment
- Added test case to verify custom_instructions works correctly
- Updated toolsnaps and documentation

The custom_instructions parameter allows users to provide additional
context, constraints, or guidance to the Copilot agent beyond what's
in the issue body, addressing the issue where additional context
would otherwise be lost.

Co-authored-by: SamMorrowDrums <4811358+SamMorrowDrums@users.noreply.github.com>

- Add http.StatusNoContent (204) to the list of accepted success status codes
- Add test case for 204 response when marking notification as done
- Retain existing test for 200 response for backwards compatibility

Co-authored-by: SamMorrowDrums <4811358+SamMorrowDrums@users.noreply.github.com>

* wip injecting ff function into tool as dep

* remove debug

* fix linter

* add better test

* adding compile time check

* move experimental to seperate config/ff value

* adding test var

* fixing test

* adding flag and possibility to call feature checker

* fixing name

Enhances the assign_copilot_to_issue tool to automatically poll for
the PR created by the Copilot coding agent after assignment.

Changes:
- Add findLinkedCopilotPR() to query issue timeline for CrossReferencedEvent
  items from PRs authored by copilot-swe-agent
- Add polling loop (9 attempts, 1s delay) matching remote server latency
- Return structured JSON with PR details when found, or helpful note otherwise
- Add PollConfig for configurable polling (used in tests to disable)
- Add GraphQLFeaturesTransport for feature flag header support

The returned response now includes:
- issue_number, issue_url, owner, repo
- pull_request object (if found during polling)
- Note with instructions to use get_copilot_job_status if PR not yet created

When polling for a linked PR after assigning Copilot to an issue,
we now capture the assignment time before the mutation and filter
to only return PRs created after that time. This prevents the tool
from incorrectly returning old PRs from previous Copilot assignments.

- Document GraphQLFeaturesTransport is for library consumers
- Convert githubv4.Int/String to native Go types in result map
- Remove misleading log comment since tool handlers lack logger access

Replace inline GraphQL-Features header logic in bearerAuthTransport with
the exported GraphQLFeaturesTransport. This removes code duplication and
ensures the transport is actually used, not just exported.

…to_issue

Add MCP progress notifications during the PR polling loop to provide
real-time status updates while waiting for Copilot to create a PR.

Changes:
- Use the request parameter to access the ServerSession for notifications
- Send an initial progress notification when polling starts
- Send progress updates on each polling attempt with attempt count
- Only send notifications when progressToken is provided by the client

This aligns with the behavior in create_pull_request_with_copilot tool
and improves the user experience during the waiting period.

* Add default label to all new issues

* Run on all issues

* Update .github/workflows/issue-labeler.yml

Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>

* Update .github/workflows/issue-labeler.yml

Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>

---------

Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>

….5.0 (#1798)

* build(deps): bump github.com/go-viper/mapstructure/v2

Bumps [github.com/go-viper/mapstructure/v2](https://github.com/go-viper/mapstructure) from 2.4.0 to 2.5.0.
- [Release notes](https://github.com/go-viper/mapstructure/releases)
- [Changelog](https://github.com/go-viper/mapstructure/blob/main/CHANGELOG.md)
- [Commits](go-viper/mapstructure@v2.4.0...v2.5.0)

---
updated-dependencies:
- dependency-name: github.com/go-viper/mapstructure/v2
  dependency-version: 2.5.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>

* chore: regenerate license files

Auto-generated by license-check workflow

---------

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>
Co-authored-by: JoannaaKL <joannaakl@github.com>

* Add tool search CLI

* Update comments

* Update docs

* Generate docs

* Dont document other commands

* Licenses

* chore: regenerate license files

Auto-generated by license-check workflow

* Try to unlock checks

* generate docs

---------

Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com>