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BulutHamali/README.md

Cloud engineering.
Grounded in science.

I’m Bulut Hamali, an AWS Certified Solutions Architect – Associate with a PhD in Biochemistry. I develop cloud-based applications, AI tools, and reproducible workflows for scientific data.

Portfolio ↗ · LinkedIn ↗ · Research ↗


Selected projects

A family of scientific analysis platforms connecting quality control, biological interpretation, and exportable workflow records.

Python · Scanpy · React · AWS · Nextflow

A leakage-safe ML workflow combining population genetics and functional genomics. Prospective evaluation produced 5.59× enrichment in the top 1% of ranked genes against a later clinical-phase release.

Python · AWS Batch · XGBoost · Nextflow · Terraform

An AI pipeline that analyzes biomedical literature to identify potential research gaps, with a model-agnostic interface supporting Groq, Anthropic, and Ollama.

Python · NLP · LLM workflows

View more projects on my website →

Areas of work

  • Cloud infrastructure: AWS, Terraform, Docker, CI/CD, and reproducible workflows.
  • Data & applied AI: Python, machine learning, literature pipelines, and multi-agent applications.
  • Scientific software: React, TypeScript, Next.js, FastAPI, and tools for complex biological data.

My background spans laboratory research, computational biology, software development, and cloud infrastructure. My projects combine data processing, web interfaces, and cloud services, with an emphasis on recording how results were produced.

AWS certifications

AWS Certified Solutions Architect – Associate: verify credential    AWS Certified Cloud Practitioner: verify credential

Solutions Architect – Associate · Cloud Practitioner
Both credentials valid through October 2029.

Additional training

  • AI Solutions Developer · Per Scholas Career Accelerator — Valedictorian, May 2026. View award ↗
  • Software Engineering Training Course · Per Scholas — completed August 2025. View certificate ↗

Research & community

PhD in Biochemistry · Medical University of Vienna
Former Nextflow Ambassador · 6,000+ LinkedIn followers


Get in touch

I’m open to cloud and AI engineering roles, research collaborations, and projects involving data, software, and scientific workflows.

Get in touch → · Cincinnati, Ohio

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  1. scRNAseq-Pipeline-GastricCancer scRNAseq-Pipeline-GastricCancer Public

    Reconstruction and augmentation of the Wang B. et al. (2021) paper's computational framework for dissecting metastatic gastric cancer through their provided single-cell transcriptomics dataset.

    Jupyter Notebook

  2. interactive-registration-form interactive-registration-form Public

    A fully interactive and responsive registration form built with HTML, CSS, and JavaScript. Features live validation, user feedback, and accessibility enhancements.

    JavaScript

  3. personal-blog-sba personal-blog-sba Public

    A clean and responsive personal blog layout with structured posts and smooth navigation, built with HTML, CSS, and JavaScript.

    JavaScript

  4. labtasker-frontend labtasker-frontend Public

    Research project and task tracker for academic labs. Kanban board, progress tracking, and JWT authentication. Built with React, TypeScript, and Node.js.

    TypeScript 18

  5. labtasker-backend labtasker-backend Public

    REST API for research project and task management. Built with Node.js, Express, MongoDB Atlas, and JWT authentication. Features Kanban-style task tracking and drag-and-drop reordering.

    JavaScript 18

  6. cargourl-ai cargourl-ai Public

    AI-powered click analytics API for URL optimization — posting time prediction, audience segmentation, and CTR reporting

    Python